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Chronic Sinus Problems: Another Role for Probiotics?

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Almost 40 million Americans suffer from chronic sinusitis. Unfortunately, most conventional treatments are not effective and don’t address the underlying cause. Find out why probiotics may represent the future of treating chronic sinus problems.

probiotics for sinuses
Sinus pressure and pain can be debilitating. b-d-s/iStock/Thinkstock

Chronic sinusitis (also known as chronic rhinosinusitis, or CRS) is one of the most common human diseases, affecting 1 in 7 American adults. And like many other modern, chronic conditions, its prevalence appears to be increasing.

CRS is a debilitating and often intractable disease. Over 20 percent of patients are unresponsive to drug therapy, and up to 40 percent of patients do not respond to surgery.

The conventional viewpoint is that CRS is caused by the presence of certain harmful species of bacteria, such as Staphylococcus aureus, Streptococcus pneumoniae, Haemophilus influenzae, and Moraxella catarrhalis. (1) In other cases, CRS may result from an immunologic reaction to fungi that colonize the sinuses. (2) Fungal species associated with this syndrome include Bipolaris specifera and Aspergillus, Curvularia, and Fusarium.

However, in a recent paper out of the University of California, San Francisco, Dr. Susan Lynch demonstrated that the primary difference between patients with CRS and control subjects was not the presence of any particular pathogenic species (which both groups had in similar amounts), but the overall diversity of the sinus microbiome. (3)

This discovery has important implications for how we can successfully treat CRS, and I will come back to it later in the article. But first, let’s take a step back and discuss the sinus microbiome—since this may be the first time you’ve heard about it.

The Microbiome: It’s Not Just about the Gut!

If you’ve been following this blog, listening to my podcast, or have read my book, you’ll know that the gut microbiome is one of my favorite topics.

But I’m not alone. Even mainstream media outlets like The New York Times, Time, The Wall Street Journal, and FOX News have done major stories on the gut microbiome and its importance in health and disease. It’s no longer an exotic concept that only scientists and health care professionals discuss; it’s now a household term.

Could probiotics be the answer to chronic sinusitis and nasal congestion?

Yet while it’s true that the majority of microbes that comprise our microbiome live in the gut, it’s also true that we have microbes in other areas of our bodies that play similarly important roles in maintaining health and preventing disease. These areas include the skin, vagina, penis, mouth, respiratory tract, and—you guessed it—the sinus cavity.

Prior to the development of DNA/PCR technology, our ability to determine the composition of microorganisms in these various areas was extremely limited. But thanks to recent advances in technology, we now have a much better idea of what “normal” and “abnormal” microbiomes look like—not only in the gut, but also on the skin and the penis and in the mouth, respiratory tract, and sinuses.

This understanding has profound implications for how we view the pathogenesis of diseases like CRS, and in turn, what treatment options might be available to patients in the future.

It’s the Forest That’s Important, Not the Trees

As I was reading Dr. Lynch’s seminal paper, I came across the following quote, which summarizes the importance of these recent discoveries and how they will change our approach to treating conditions that are microbial in their origin:

Because of extensive use of conventional laboratory culture approaches to detect microbial species, we have been conditioned to view chronic or acute infections as exclusively due to a single pathogenic species. However, recent studies have demonstrated that the composition of the resident microbiota in a given niche can strongly influence the behavior of specific species, particularly pathogens, and, as such, represents an important contributory factor to disease etiology.

The idea here is that it isn’t the presence of a particular pathogen that matters most, but rather the environment in which the pathogen is present. If you extend this idea to thinking about treatment approaches, it follows that focusing on eradicating a particular pathogen or species may be misguided, and that a better approach is restoring microbial diversity.

This has already become evident with the gut microbiome. Clostridium difficile is a virulent infection that still kills almost 30,000 people in the U.S. each year. We’ve thrown every antibiotic we have at it, but they are often ineffective in the most severe cases.

Yet fecal microbiota transplants—which are essentially massive infusions of human probiotics—are over 90 percent effective, even in cases where patients have failed multiple courses of antibiotics. (4)

If we apply this same reasoning to the treatment of CRS, it suggests that probiotics—rather than antibiotics—may be a better solution. Antibiotics may kill harmful species of bacteria, but they are likely to further reduce microbial diversity, which would be expected to worsen CRS over time if Dr. Lynch’s theory is correct.

With this in mind, let’s see what the research has to say about probiotics and sinus problems.

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Probiotics for Chronic Sinus Problems

As it turns out, there are several published studies suggesting that probiotics may be an effective treatment for chronic sinus problems.

One review in the Journal of Allergy found that “an emerging number of publications demonstrate beneficial effects using probiotics in clinical double-blind placebo-controlled trials in allergic rhinitis (AR).” (5) Although data on probiotics and non-allergic CRS are lacking, there are several lines of evidence to suggest that probiotics may be effective in these cases.

First, probiotics have been shown to disrupt biofilms, which are present in CRS and difficult to eradicate through other means. (6)

Second, both human and animal studies have shown that oral probiotics reduce colonization of the nose and upper respiratory tract by pathogenic bacteria (e.g., Staphylococcus aureus, Streptococcus pneumoniae, and β-hemolytic streptococci). (7, 8)

Third, upper respiratory tract infections often precede the development of CRS, and probiotics have been shown to be effective in preventing them. (9)

Finally, although this is certainly not peer-reviewed evidence, I can tell you anecdotally from my work with patients that many CRS sufferers do seem to improve with strategies aimed at restoring the microbiome—such as eating more fermentable fiber and fermented foods, and/or taking prebiotics and probiotics.

Future Directions: Nasal Probiotic Sprays for Repopulating the Sinus Microbiome?

So far we’ve been talking about the role of oral probiotics in treating CRS. But if a disruption of the sinus microbiome is the true underlying cause of CRS, wouldn’t it make more sense to address that more directly?

Dr. Lynch found that most patients with CRS are lacking in a particular species of bacteria called Lactobacillus sakei. This bacteria is a natural, protective species in our nose, but (as the name implies) it is also used to make certain fermented beverages and foods like sake and kimchi.

One might suspect that Dr. Lynch and her peers are developing a nasal spray that contains Lactobacillus sakei to be used in the treatment of CRS. Of course such a treatment will have to be developed and tested for safety and effectiveness in human clinical trials.

Given that this may take several years, some folks have decided to take matters into their own hands, er, noses.

A blog called Lacto Bacto, which is written by CRS sufferer Mara Silgailis, describes a DIY approach that appears to have helped many people with CRS. It involves putting small amounts of kimchi juice directly into the nostrils. According to Mara, she has essentially cured herself and her family of their long-term CRS, and they have been antibiotic-free for more than two years.

Along the same lines, I’ve heard anecdotal reports from patients and people online who have created DIY nasal probiotic sprays and even crushed up probiotic tablets and sniffed them, achieving somewhat miraculous results.

Of course I can’t recommend or endorse these procedures, because they haven’t been tested for safety or efficacy. It would seem that the risk is relatively low, but it’s at least possible that some of the other microbes in kimchi or other oral probiotics may not be beneficial for the sinus microbiome. We’re really just starting to scratch the surface in this area of research, and there’s still a lot that we don’t understand. So if you decide to perform these experiments at home, proceed at your own risk!

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254 Comments

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  1. Very interesting! I suffered from allergies my whole life but started getting chronic sinus infections about 5 years ago. I started immunotherapy and daily sinus rinses which improved my symptoms but I still kept reacting to the injections and made frustratingly slow progress. After going AIP and including fermented foods I got to my maintenance dose and only had 3 infections the first year. At the beginning of this year I started daily oral probiotics and have continued the daily sinus rinses and have only had 1 infection! I was able to stop all of my medication over the winter. My doctor and I are working on tweaking my immunotherapy formula so that I can reduce or get completely off my meds year-round.

  2. Matt, These are the strains in the probiotic I am sniffing: Lactobacillus plantarum, Lactobacillus acidophilus, lactobacillus rhamnosus, bifidobacterium lactis, bifidobacterium longum, 50 billion CFU, brand Pure encapsulations.

  3. After reading this article, and having painfully endured a pseudomonas infection in my occluded left maxillary sinus for over 3 weeks, I decided to try sniffing 1/4 capsule of my probiotic into my left sinus. It was 9Pm at night and I was just about to take my nightly Motrin so the pain would not prevent me from sleeping. Within 3 minutes, I noticed notable improvement and within 15 minutes, all pain evaporated! I have been inserting the probiotic every 12 hours or so, and the terrible pain has not returned. (I am using much less than 1/4 capsule subsequent to the first night; that much might not have been necessary; I really don’t know.) The sinus infection is not completely cured yet, but it appears to be going steadily in the right direction. Before doing this probiotic in my nose, I had religiously been doing neti pot with echinaccea and all sorts of other holistic remedies my wonderful naturopath doctor suggested, eventually even including a fungus prescription, and then subsequently an antibiotic–neither had any effect. I could say a lot more, but I want to convey that sniffing the probiotic in the nose was dramatic improvement and still holding.

  4. Hi Chris – thank you so much for your insights into so many health issues. You have given me hope and I am now embarked on a journey of discovery and hope to overcome chronic sinusitis, bronchiectasis and Hashimotos, rather than just stay on medication as prescribed. I have started on LDN. I also bought a little nebuliser, and have been nebulising colloidal silver into my sinus and lungs over the past few weeks. It certainly hits infection on the head.

  5. I’ve used grapefruit seed extract, oregano, salt, and other things in nasal sprays.

    I’ve also used probiotics. They help!

    I think that having a chornic nasal infection can result in a systemic infection, as you are constantly swallowing the infection into your body. It is an important thing to tackle.

  6. I have success with difflucan and eliminating mucus causing grains (rice, wheat), veg (okra, yams) some lentills. IMHO externally applied remedies must be used in conjunction with internaly taken remedies since it is a systematic problem.

    • Hi Zakaria!.What dosage did you use and how long did you take the Difflucan for systemic infection of candida/fungi ? Can you detail please ? Thanks a lot!

  7. Wow, Chris! Thank you for this information! I have suffered from CRS most of my life. It has improved since I’ve improved and changed my diet these past few years, but I was recently under tremendous stress and pressure and voila, I became sick again. Nice to have healthier options. I was also interested in essential oils as a treatment…, have you any advice or information on that approach? Thanks again! Cheers!

  8. For ten years I have been using a neti pot, which has made a huge difference in my sinus symptoms. When i first started, i had to use it 3x per day, then went to 2x per day, then to 1x. I’m sure restoring the microbiome would be a good idea at some point, but until i get all my many chronic and autoimmune symptoms under control and improve my terrain, the neti pot is a simple inexpensive and effective quick fix. By doing this and oilpulling I feel i am greatly reducing the load on my poor overworked immune system.

  9. I am about to go open a probiotic capsule into my neti pot and have kim chi for breakfast!

  10. Chris, I have had for five years what I refer to allergies. I blame it on living in AZ with all the dust from lack of rain. The first 30 years living here, I had no problems. The ENT says I have rhinitis/allergies and gave me sprays which do not work that well. My sinuses drain down my throat and I am constantly spitting to clear it which probably is giving me a sore throat most of the time. My ear canals itch and hurt and when it really gets bad, my nose runs like a river besides draining in my throat. Allegra and zyrtek give me gas and bloating and constipation after a few days. Claritan-D affects my neurotransmitters and my whole body feels like a raw nerve after two days. I take many vitamins and supplements for years and among them are pre and probiotics. So much for that. Any other suggestions?

    • Have you tried Xyzal? It’s a third generation antihistamine. It works really well for me, I hadn’t been able to find an antihistamine before this one. I take it at night and it helps me to relax and sleep. I just take 1/2, otherwise it makes me really groggy in the morning.

  11. This is a really interesting conversation that give hope! I have Chronic Fungal Rhinitis which I have been told is “untreatable” outside of the use of regular steriods. I have had it now longer than I can remember, with nasal polyps and hence I have virutally no sense of smell or taste. I have found that dealing with my raging Candida infection helped emensely with mucos production and would encourage anyone who hasn’t looked into that to take a look. But still not much difference on the smell front. I will be interested to look into this some more as I have tried “everything” over the years.

  12. I wonder if there’s any study on this for the perennial allergic rhinitis (unidentified allergen) that I suffer from? Google Scholaring right away!

  13. I dont know if this is what I am plagued with since you didnt mention any symptoms, alls I know is I use a spray to unclog my nose but not all the time

  14. I had sinus problems all my life. But a few months ago I decided to change my diet. As part of my diet I began making my own yogurt from Liberte goal yogurt with probiotics as a starter and goat milk,

    I noticed that my runny, snuffled nose seem to disappear over night. I could easily go through half dozen handkerchiefs a day, when I would suddenly get this drip, drip. Then at times I would also end up with blood on my handkerchief. Very thankful for my new me.

  15. I began a course of 80,000iu Serrapeptase capsules, 6 a day for a week, tapering down to 3 a day now, a few weeks ago and my constant sinusitis has almost completely gone. I used to have sudden, painful pains and aches, in my sinuses during the day, and now hardly get them at all. Serrapeptase claims to remove scar tissue, in fact any dead matter, including chronic sinus problems.

    I plan to stay on about 2 capsules daily when I taper down to that, and watch what happens. I’ve had chronic sinus pains for years up until this recent experience with Serrapeptase.

    • I get recurring Sinus Infections and Sinusitus and I am sick and tired of these illnesses! Can I impose upon you to tell me where you purchase this item, e.g. Walmart or a Website, please? Eugene, [email protected].

    • I second the use of serrapeptase. I recently underwent major surgery and serrapeptase was recommended as an adjunct to promote wound healing/minimize scar formation. I have had sinus/asthma issues for 25+ years and both improved radically within 2 weeks of use. I ran out and have been waiting a week for an online order, and my nasal congestion has returned. I’ll be sticking with the serrapeptase in future!

  16. I have been using a treatment for candida for the last 3 months and am vastly improved in my sinus condition supplementing with probiotics and free dairy, yeast and sugar…amazed at results after sffering cronic s for over10 years

    • Hi Di Eagle! Can you please help me with some advice regarding treatment of candida? What have you used for treat candida in the last 3-4 months and do you think it helped you in this improvement? What kind of treatment and what suppliments did you use? Thanks

  17. Chris,I have really enjoyed the article because I have been a sufferer of sinus problems for years. I use Xlear every morning and before bed and have for about four years now. What a difference it has made. However, I am interested in a good brand of probiotics to buy because I have not been taking them for my gut or my sinuses so I really hoping maybe you can recommend a brand. One that has a good quality of what is required that a person needs. That’s hard to figure out when there’s so many on the market and you just don’t know which one to buy! I would be so very grateful for your recommendation!!! Thanks

    • Which probiotic would you recommend fo someone with chronic sinus problems and allergies ??